dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02859
Location and strand information: 2019 - 3524 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.1071
Protein molecular weight: 56915.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02860
Location and strand information: 3541 - 4503 (-)
Family: CBM42|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.8185
Protein molecular weight: 36930.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02861
Location and strand information: 4669 - 6054 (-)
Family: 2.A.25.1.4
Protein type: TC
Protein description: Amino-acid carrier protein AlsT

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02862
Location and strand information: 6167 - 7678 (-)
Family: GH43_4|GH43
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase 2
Protein isoelectric point: 4.2946
Protein molecular weight: 56165.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02863
Location and strand information: 7821 - 8819 (-)
Family: null
Protein type: null
Protein description: tRNA-dihydrouridine(16) synthase

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02864
Location and strand information: 8830 - 11184 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02865
Location and strand information: 11231 - 15331 (-)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3709
Protein molecular weight: 148581.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02866
Location and strand information: 15468 - 17282 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000076_24|CGC1
Gene ID: MGYG000000076_02867
Location and strand information: 17257 - 19113 (-)
Family: 3.A.1.210.8
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000076_02859	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	2019	3524	-	GH51
MGYG000000076_02860	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	3541	4503	-	CBM42\| GH43\| GH43_26
MGYG000000076_02861	Amino-acid carrier protein AlsT	TC	4669	6054	-	2.A.25.1.4
MGYG000000076_02862	Extracellular endo-alpha-(1->5)-L-arabinanase 2	CAZyme	6167	7678	-	GH43_4\| GH43
MGYG000000076_02863	tRNA-dihydrouridine(16) synthase	null	7821	8819	-	Dus
MGYG000000076_02864	hypothetical protein	null	8830	11184	-	Phage_lysozyme2\| Flg_new\| Flg_new\| Flg_new\| Flg_new\| Flg_new\| Flg_new
MGYG000000076_02865	hypothetical protein	CAZyme	11231	15331	-	GH25
MGYG000000076_02866	Vitamin B12 import ATP-binding protein BtuD	TC	15468	17282	-	3.A.1.111.2
MGYG000000076_02867	Vitamin B12 import ATP-binding protein BtuD	TC	17257	19113	-	3.A.1.210.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature